0825 GMT December 14, 2019
Jean-Jacques Muyembe warned that the current deadly outbreak could last up to three years, BBC reported.
He said a man who died this week in the city of Goma, on the Rwandan border, had 10 children and had infected a number of people.
The Ebola outbreak has killed more than 1,800 people in the past year.
At least 2,700 people have been infected in the worst Ebola outbreak in the DR Congo's history.
Tackling the disease has also been complicated by conflict in the region.
Earlier this week, Rwanda briefly closed its border with the DR Congo amid fears the disease would spread to the country.
What did Muyembe say?
Speaking in Goma on Friday, Muyembe said more needed to be done to tackle the outbreak, as an estimated half of Ebola cases were going unidentified.
"If we continue on that basis, this epidemic could last two or three years," Muyembe warned.
Speaking about the latest victim in Goma, a gold miner, he said that the man "will have contaminated several people".
"But for the moment it is only his wife and one of his 10 children who are sick," Muyembe said.
He added that the miner's sister had travelled to South Kivu Province, but was quickly located and brought back to Goma.
Cases in the city earlier prompted the World Health Organization (WHO) to declare the outbreak as an emergency of international concern.
What is the situation on the ground?
Goma, home to two million people, is the capital of North Kivu, one of the two provinces in DR Congo which have borne the brunt of the epidemic.
The city lies just across the border from the Rwandan city of Gisenyi, which has a population of about 85,000 people. Many residents cross the frontier for work and other activities, although illegal routes are also used.
Efforts to control the outbreak have been hampered by violence against healthcare workers and Ebola treatment facilities. Seven people have been killed and 58 injured in 198 attacks this year.
A major problem has been the distrust of healthcare workers. As a result, about a third of Ebola deaths have not been at specialist treatment centers but in the community, where there is a greater risk of the disease spreading to neighbors and relatives.
The world's worst Ebola epidemic killed more than 11,000 people in West Africa between 2014 and 2016.
What is Ebola?
Ebola is a virus that initially causes sudden fever, intense weakness, muscle pain and a sore throat. It progresses to vomiting, diarrhoea, and both internal and external bleeding.
People are infected when they have direct contact through broken skin, or the mouth and nose, with the blood, vomit, faeces or bodily fluids of someone with Ebola.
Patients tend to die from dehydration and multiple organ failure.
Is there no vaccine?
Yes, there is. It is 99 percent effective and more than 161,000 people have received it.
However, not everybody is vaccinated — only those who come into direct contact with an Ebola patient, and people who come into contact with them. And some of those people refuse to take it.
People give a variety of reasons for not taking the vaccine, including:
The vaccine, made by Merck, was developed during the epidemic in West Africa and has been available throughout the latest outbreak.
It has proven effective but is in relatively short supply, so the WHO has recommended a second vaccine made by Johnson & Johnson to complement it.